Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.24□□□□□ -1.25
Hmgb1P63158 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 AC153494.1-201ENSMUST00000218664 3041 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm8250-201ENSMUST00000117398 774 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm8692-201ENSMUST00000118102 438 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm15621-201ENSMUST00000119162 364 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm15311-201ENSMUST00000119682 282 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm15305-201ENSMUST00000120354 288 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm22025-201ENSMUST00000122734 302 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm4997-201ENSMUST00000154056 360 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm3650-201ENSMUST00000180600 747 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm26587-201ENSMUST00000180795 989 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm28011-201ENSMUST00000184097 175 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm44342-201ENSMUST00000196874 129 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm44383-201ENSMUST00000198940 129 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm21054-201ENSMUST00000203981 380 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Hmgb1P63158 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm45725-201ENSMUST00000212962 337 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm19056-201ENSMUST00000218220 797 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Gm9088-201ENSMUST00000220237 508 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hmgb1P63158 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.24□□□□□ -1.25
Hmgb1P63158 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hmgb1P63158 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm14904-201ENSMUST00000117067 335 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm13141-201ENSMUST00000117417 456 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm13744-201ENSMUST00000118953 850 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm12229-201ENSMUST00000120487 468 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm25057-201ENSMUST00000157366 88 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm23810-201ENSMUST00000175150 74 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Hmgb1P63158 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm43315-201ENSMUST00000198120 313 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm18838-201ENSMUST00000204855 886 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm45042-201ENSMUST00000207377 211 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 AC192088.2-201ENSMUST00000227590 411 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms