Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.58□□□□□ -1.36
NcanP55066 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NcanP55066 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NcanP55066 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.57□□□□□ -1.36
NcanP55066 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.57□□□□□ -1.36
NcanP55066 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NcanP55066 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm23750-201ENSMUST00000104222 132 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NcanP55066 Gm14172-201ENSMUST00000118255 644 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm12937-201ENSMUST00000118333 448 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm13531-201ENSMUST00000121893 543 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm26172-201ENSMUST00000158421 134 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.57□□□□□ -1.36
NcanP55066 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NcanP55066 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NcanP55066 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm20545-201ENSMUST00000174739 210 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm21816-201ENSMUST00000179255 360 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm2053-201ENSMUST00000195671 631 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm31211-201ENSMUST00000199170 253 ntBASIC6.57□□□□□ -1.36
NcanP55066 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.57□□□□□ -1.36
NcanP55066 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.57□□□□□ -1.36
NcanP55066 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.57□□□□□ -1.36
NcanP55066 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Gm6068-201ENSMUST00000222270 387 ntBASIC6.57□□□□□ -1.36
NcanP55066 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NcanP55066 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
NcanP55066 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Grik1-209ENSMUST00000227986 2942 ntBASIC6.57□□□□□ -1.36
NcanP55066 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NcanP55066 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.57□□□□□ -1.36
NcanP55066 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
NcanP55066 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.57□□□□□ -1.36
NcanP55066 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.57□□□□□ -1.36
NcanP55066 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
NcanP55066 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NcanP55066 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NcanP55066 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NcanP55066 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.56□□□□□ -1.36
NcanP55066 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.56□□□□□ -1.36
NcanP55066 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.56□□□□□ -1.36
NcanP55066 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.56□□□□□ -1.36
NcanP55066 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NcanP55066 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.56□□□□□ -1.36
NcanP55066 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
NcanP55066 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.56□□□□□ -1.36
NcanP55066 Gm13491-201ENSMUST00000118267 235 ntBASIC6.56□□□□□ -1.36
NcanP55066 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gm7927-201ENSMUST00000118818 880 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm13604-201ENSMUST00000119332 482 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm14900-201ENSMUST00000120304 733 ntBASIC6.56□□□□□ -1.36
NcanP55066 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.56□□□□□ -1.36
NcanP55066 Mir1947-201ENSMUST00000158235 85 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NcanP55066 Mir6343-201ENSMUST00000183584 84 ntBASIC6.56□□□□□ -1.36
NcanP55066 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
NcanP55066 Mir6933-201ENSMUST00000184982 81 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm28188-201ENSMUST00000190483 236 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.56□□□□□ -1.36
NcanP55066 Gm37308-201ENSMUST00000194684 100 ntBASIC6.56□□□□□ -1.36
NcanP55066 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.56□□□□□ -1.36
NcanP55066 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.56□□□□□ -1.36
NcanP55066 Gm18100-201ENSMUST00000200897 452 ntBASIC6.56□□□□□ -1.36
NcanP55066 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC6.56□□□□□ -1.36
NcanP55066 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.56□□□□□ -1.36
NcanP55066 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.56□□□□□ -1.36
NcanP55066 Gm2614-201ENSMUST00000223227 403 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms