Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sox3P53784 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.9□□□□□ -1.47
Sox3P53784 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.9□□□□□ -1.47
Sox3P53784 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Sox3P53784 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Sox3P53784 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox3P53784 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
Sox3P53784 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm22714-201ENSMUST00000116894 78 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm13013-201ENSMUST00000119087 523 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm11481-201ENSMUST00000120069 255 ntBASIC5.89□□□□□ -1.47
Sox3P53784 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.89□□□□□ -1.47
Sox3P53784 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.89□□□□□ -1.47
Sox3P53784 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm26086-201ENSMUST00000157902 263 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm22724-201ENSMUST00000158091 127 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm22261-201ENSMUST00000158691 324 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm2058-201ENSMUST00000178791 560 ntBASIC5.89□□□□□ -1.47
Sox3P53784 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.89□□□□□ -1.47
Sox3P53784 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.89□□□□□ -1.47
Sox3P53784 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox3P53784 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox3P53784 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm15732-201ENSMUST00000079794 480 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Mir27a-201ENSMUST00000083510 87 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Mir337-201ENSMUST00000083592 97 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.89□□□□□ -1.47
Sox3P53784 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox3P53784 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox3P53784 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox3P53784 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sox3P53784 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm20486-201ENSMUST00000101544 128 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm7146-201ENSMUST00000116079 739 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gm14335-201ENSMUST00000119165 810 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Sox3P53784 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm11545-201ENSMUST00000146507 375 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gm27970-201ENSMUST00000184854 407 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm38384-201ENSMUST00000195413 1122 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gm37358-201ENSMUST00000195492 479 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gm43054-201ENSMUST00000199495 884 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.88□□□□□ -1.47
Sox3P53784 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.88□□□□□ -1.47
Sox3P53784 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Gm18405-201ENSMUST00000220743 511 ntBASIC5.88□□□□□ -1.47
Sox3P53784 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.88□□□□□ -1.47
Sox3P53784 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.88□□□□□ -1.47
Sox3P53784 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.88□□□□□ -1.47
Sox3P53784 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox3P53784 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms