Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.19□□□□□ -1.26
Sox1P53783 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.19□□□□□ -1.26
Sox1P53783 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Sox1P53783 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
Sox1P53783 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Sox1P53783 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Gm2199-201ENSMUST00000119065 874 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm12881-201ENSMUST00000121191 203 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm14907-201ENSMUST00000121948 854 ntBASIC7.18□□□□□ -1.26
Sox1P53783 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC7.18□□□□□ -1.26
Sox1P53783 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm22312-201ENSMUST00000158005 130 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm24228-201ENSMUST00000158829 129 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm18354-201ENSMUST00000173515 1068 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm26784-201ENSMUST00000181666 410 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm7745-201ENSMUST00000182235 973 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Sox1P53783 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm28655-201ENSMUST00000191538 692 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm37098-201ENSMUST00000192290 244 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm2229-201ENSMUST00000193328 710 ntBASIC7.18□□□□□ -1.26
Sox1P53783 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm34015-201ENSMUST00000194908 451 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm42767-201ENSMUST00000198583 632 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm43725-201ENSMUST00000200122 369 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm44565-201ENSMUST00000208194 269 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm18586-201ENSMUST00000217265 518 ntBASIC7.18□□□□□ -1.26
Sox1P53783 AC132384.8-201ENSMUST00000218152 1204 ntBASIC7.18□□□□□ -1.26
Sox1P53783 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Gm36758-201ENSMUST00000222594 310 ntBASIC7.18□□□□□ -1.26
Sox1P53783 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.18□□□□□ -1.26
Sox1P53783 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Sox1P53783 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm16415-201ENSMUST00000080097 489 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Sox1P53783 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Sox1P53783 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.18□□□□□ -1.26
Sox1P53783 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Sox1P53783 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Sox1P53783 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm9408-201ENSMUST00000197375 1505 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Klf5-202ENSMUST00000226784 2852 ntBASIC7.17□□□□□ -1.26
Sox1P53783 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Sox1P53783 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Sox1P53783 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm4919-201ENSMUST00000117825 604 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms