Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Rfx1P48377 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rfx1P48377 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rfx1P48377 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.02□□□□□ -1.12
Rfx1P48377 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm42541-201ENSMUST00000199871 2249 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm22707-201ENSMUST00000103834 110 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm25773-201ENSMUST00000116718 127 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm11833-201ENSMUST00000118393 853 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm15665-201ENSMUST00000119116 847 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm11259-201ENSMUST00000120554 715 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm22794-201ENSMUST00000157228 306 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm3221-201ENSMUST00000164869 440 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm23162-201ENSMUST00000175081 121 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm27659-201ENSMUST00000183472 98 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm27507-201ENSMUST00000184199 93 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm6680-201ENSMUST00000192789 950 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm8999-201ENSMUST00000204951 969 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Rfx1P48377 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC8.02□□□□□ -1.13
Rfx1P48377 AC192616.3-201ENSMUST00000220797 1124 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Rfx1P48377 AC150560.3-201ENSMUST00000227442 455 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rfx1P48377 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 AC116950.1-201ENSMUST00000226322 3250 ntBASIC8.02□□□□□ -1.13
Rfx1P48377 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rfx1P48377 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rfx1P48377 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Rfx1P48377 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rfx1P48377 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm37913-201ENSMUST00000192925 2544 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Rfx1P48377 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm22470-201ENSMUST00000104117 130 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm11865-201ENSMUST00000118093 859 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm14007-201ENSMUST00000118288 210 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm8534-201ENSMUST00000118553 766 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm15129-201ENSMUST00000119673 279 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm24393-201ENSMUST00000158135 97 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm16139-201ENSMUST00000160015 420 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Ear-ps10-201ENSMUST00000161871 460 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm7420-201ENSMUST00000162836 842 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rfx1P48377 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm26991-201ENSMUST00000180950 620 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm26528-201ENSMUST00000181965 283 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Mir8094-201ENSMUST00000183361 117 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm5261-201ENSMUST00000185860 713 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm29470-201ENSMUST00000188007 696 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm37977-201ENSMUST00000193096 721 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm18340-201ENSMUST00000196342 609 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm43160-201ENSMUST00000196453 421 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm44931-201ENSMUST00000206056 545 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Gm17997-201ENSMUST00000211801 840 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC8.01□□□□□ -1.13
Rfx1P48377 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Rfx1P48377 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.01□□□□□ -1.13
Rfx1P48377 AC166358.6-201ENSMUST00000221834 1206 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms