Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm6051-201ENSMUST00000201529 352 ntBASIC6.14□□□□□ -1.43
HttP42859 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.14□□□□□ -1.43
HttP42859 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.14□□□□□ -1.43
HttP42859 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HttP42859 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HttP42859 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.13□□□□□ -1.43
HttP42859 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC6.13□□□□□ -1.43
HttP42859 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Gm15670-201ENSMUST00000117740 447 ntBASIC6.13□□□□□ -1.43
HttP42859 Gm4989-201ENSMUST00000118711 749 ntBASIC6.13□□□□□ -1.43
HttP42859 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HttP42859 Gm26925-201ENSMUST00000182470 957 ntBASIC6.13□□□□□ -1.43
HttP42859 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.13□□□□□ -1.43
HttP42859 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.13□□□□□ -1.43
HttP42859 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HttP42859 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.13□□□□□ -1.43
HttP42859 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HttP42859 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HttP42859 Gm11346-201ENSMUST00000118346 704 ntBASIC6.13□□□□□ -1.43
HttP42859 Gm23023-201ENSMUST00000158767 109 ntBASIC6.13□□□□□ -1.43
HttP42859 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.13□□□□□ -1.43
HttP42859 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.13□□□□□ -1.43
HttP42859 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.13□□□□□ -1.43
HttP42859 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HttP42859 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HttP42859 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HttP42859 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.13□□□□□ -1.43
HttP42859 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.13□□□□□ -1.43
HttP42859 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HttP42859 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.13□□□□□ -1.43
HttP42859 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.12□□□□□ -1.43
HttP42859 Gm43870-201ENSMUST00000205102 4369 ntBASIC6.12□□□□□ -1.43
HttP42859 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Gm22899-201ENSMUST00000104540 131 ntBASIC6.12□□□□□ -1.43
HttP42859 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.12□□□□□ -1.43
HttP42859 Gm11975-201ENSMUST00000118772 481 ntBASIC6.12□□□□□ -1.43
HttP42859 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.12□□□□□ -1.43
HttP42859 Gm25293-201ENSMUST00000122792 285 ntBASIC6.12□□□□□ -1.43
HttP42859 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.12□□□□□ -1.43
HttP42859 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
HttP42859 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.12□□□□□ -1.43
HttP42859 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.12□□□□□ -1.43
HttP42859 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.12□□□□□ -1.43
HttP42859 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
HttP42859 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.12□□□□□ -1.43
HttP42859 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Gm11878-201ENSMUST00000117908 400 ntBASIC6.12□□□□□ -1.43
HttP42859 Gm11826-201ENSMUST00000118781 438 ntBASIC6.12□□□□□ -1.43
HttP42859 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
HttP42859 Gm15803-201ENSMUST00000120118 394 ntBASIC6.12□□□□□ -1.43
HttP42859 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HttP42859 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.12□□□□□ -1.43
HttP42859 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
HttP42859 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.12□□□□□ -1.43
HttP42859 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.12□□□□□ -1.43
HttP42859 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.12□□□□□ -1.43
HttP42859 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.12□□□□□ -1.43
HttP42859 Gm25176-201ENSMUST00000122640 125 ntBASIC6.12□□□□□ -1.43
HttP42859 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.12□□□□□ -1.43
HttP42859 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.12□□□□□ -1.43
HttP42859 AC125543.1-201ENSMUST00000222778 101 ntBASIC6.12□□□□□ -1.43
HttP42859 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HttP42859 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HttP42859 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HttP42859 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HttP42859 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HttP42859 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
HttP42859 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms