Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28566-201ENSMUST00000186714 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28194-201ENSMUST00000187412 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28886-202ENSMUST00000187889 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28554-202ENSMUST00000189175 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29213-202ENSMUST00000189703 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28851-202ENSMUST00000189757 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28461-201ENSMUST00000190023 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm19030-201ENSMUST00000194947 552 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm6543-201ENSMUST00000197353 808 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC8.17□□□□□ -1.1
Col18a1P39061 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col18a1P39061 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Gm37082-201ENSMUST00000192629 1927 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Gm22778-201ENSMUST00000104090 128 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Gm12040-201ENSMUST00000118357 537 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Gm12293-201ENSMUST00000121898 590 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Gm17511-201ENSMUST00000172206 342 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Gm43093-201ENSMUST00000202439 1213 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Zfp429-203ENSMUST00000224684 524 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.16□□□□□ -1.1
Col18a1P39061 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Col18a1P39061 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col18a1P39061 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms