Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm5260-201ENSMUST00000186157 949 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm18407-201ENSMUST00000192126 790 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm37809-201ENSMUST00000195050 931 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm37358-201ENSMUST00000195492 479 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm18839-201ENSMUST00000204292 670 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.5□□□□□ -1.53
Hoxc5P32043 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm44892-201ENSMUST00000208595 488 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm3266-201ENSMUST00000217832 591 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.5□□□□□ -1.53
Hoxc5P32043 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxc5P32043 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm24200-201ENSMUST00000082955 157 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.5□□□□□ -1.53
Hoxc5P32043 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Hoxc5P32043 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm8722-201ENSMUST00000121466 769 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm12396-201ENSMUST00000121600 306 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.49□□□□□ -1.53
Hoxc5P32043 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm26353-201ENSMUST00000158224 255 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm8009-201ENSMUST00000191672 436 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm5886-202ENSMUST00000203957 522 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm18689-201ENSMUST00000203969 902 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm19182-201ENSMUST00000207139 577 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.49□□□□□ -1.53
Hoxc5P32043 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm5229-201ENSMUST00000039375 354 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm8412-201ENSMUST00000077493 440 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.49□□□□□ -1.53
Hoxc5P32043 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxc5P32043 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hoxc5P32043 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.48□□□□□ -1.53
Hoxc5P32043 Pramel-201ENSMUST00000118979 1383 ntBASIC5.48□□□□□ -1.53
Hoxc5P32043 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.48□□□□□ -1.53
Hoxc5P32043 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.48□□□□□ -1.53
Hoxc5P32043 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms