Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm15877-201ENSMUST00000121897 964 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm8604-201ENSMUST00000183150 965 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm18427-201ENSMUST00000195422 515 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm18996-201ENSMUST00000214851 755 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm6477-201ENSMUST00000217098 764 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Mir331-201ENSMUST00000083673 96 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col2a1P28481 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Col2a1P28481 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm26078-201ENSMUST00000104067 128 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Gm13890-201ENSMUST00000117578 390 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Gm15840-201ENSMUST00000122099 943 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm27409-201ENSMUST00000184727 80 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.81□□□□□ -1.32
Col2a1P28481 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm5027-201ENSMUST00000206700 375 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 LOC665443-201ENSMUST00000212284 796 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col2a1P28481 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col2a1P28481 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col2a1P28481 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.81□□□□□ -1.32
Col2a1P28481 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.81□□□□□ -1.32
Col2a1P28481 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Gm24886-201ENSMUST00000104384 123 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm13473-201ENSMUST00000119289 367 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Gm4234-201ENSMUST00000119747 714 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Gm13533-201ENSMUST00000121104 177 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm25227-201ENSMUST00000158204 112 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col2a1P28481 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm45874-201ENSMUST00000212423 346 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm9202-201ENSMUST00000223036 437 ntBASIC6.8□□□□□ -1.32
Col2a1P28481 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.8□□□□□ -1.32
Col2a1P28481 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col2a1P28481 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Col2a1P28481 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Col2a1P28481 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms