Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.38□□□□□ -1.55
P20040 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.38□□□□□ -1.55
P20040 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.38□□□□□ -1.55
P20040 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.38□□□□□ -1.55
P20040 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.38□□□□□ -1.55
P20040 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.38□□□□□ -1.55
P20040 Gm24465-201ENSMUST00000178398 107 ntBASIC5.38□□□□□ -1.55
P20040 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Gm27348-201ENSMUST00000184511 170 ntBASIC5.38□□□□□ -1.55
P20040 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.38□□□□□ -1.55
P20040 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.38□□□□□ -1.55
P20040 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.38□□□□□ -1.55
P20040 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.38□□□□□ -1.55
P20040 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.38□□□□□ -1.55
P20040 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.38□□□□□ -1.55
P20040 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.38□□□□□ -1.55
P20040 Gm9237-201ENSMUST00000221499 548 ntBASIC5.38□□□□□ -1.55
P20040 Gm7557-201ENSMUST00000221935 865 ntBASIC5.38□□□□□ -1.55
P20040 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.38□□□□□ -1.55
P20040 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.38□□□□□ -1.55
P20040 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.38□□□□□ -1.55
P20040 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.38□□□□□ -1.55
P20040 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.38□□□□□ -1.55
P20040 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.38□□□□□ -1.55
P20040 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.38□□□□□ -1.55
P20040 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
P20040 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
P20040 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.37□□□□□ -1.55
P20040 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
P20040 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.37□□□□□ -1.55
P20040 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
P20040 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
P20040 Gm26144-201ENSMUST00000104475 132 ntBASIC5.37□□□□□ -1.55
P20040 Gm15901-201ENSMUST00000117663 941 ntBASIC5.37□□□□□ -1.55
P20040 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
P20040 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
P20040 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.37□□□□□ -1.55
P20040 Gm12140-201ENSMUST00000121214 544 ntBASIC5.37□□□□□ -1.55
P20040 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.37□□□□□ -1.55
P20040 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.37□□□□□ -1.55
P20040 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Mir1960-201ENSMUST00000157488 78 ntBASIC5.37□□□□□ -1.55
P20040 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.37□□□□□ -1.55
P20040 Gm4845-201ENSMUST00000179202 562 ntBASIC5.37□□□□□ -1.55
P20040 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.37□□□□□ -1.55
P20040 Mir6989-201ENSMUST00000184812 65 ntBASIC5.37□□□□□ -1.55
P20040 Gm37177-201ENSMUST00000193768 417 ntBASIC5.37□□□□□ -1.55
P20040 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.37□□□□□ -1.55
P20040 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.37□□□□□ -1.55
P20040 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.37□□□□□ -1.55
P20040 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.37□□□□□ -1.55
P20040 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
P20040 Gm26063-201ENSMUST00000083378 107 ntBASIC5.37□□□□□ -1.55
P20040 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
P20040 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.37□□□□□ -1.55
P20040 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
P20040 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.37□□□□□ -1.55
P20040 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
P20040 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.37□□□□□ -1.55
P20040 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
P20040 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
P20040 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.36□□□□□ -1.55
P20040 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
P20040 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.36□□□□□ -1.55
P20040 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
P20040 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.36□□□□□ -1.55
P20040 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
P20040 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
P20040 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.36□□□□□ -1.55
P20040 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms