Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28698-201ENSMUST00000187734 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29224-201ENSMUST00000187965 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29189-201ENSMUST00000188018 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28546-201ENSMUST00000188221 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29476-201ENSMUST00000188397 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29505-201ENSMUST00000188424 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28125-201ENSMUST00000188470 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29391-201ENSMUST00000188545 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29280-201ENSMUST00000188571 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28349-201ENSMUST00000188590 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29652-201ENSMUST00000188622 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28819-206ENSMUST00000188816 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29079-201ENSMUST00000188875 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28213-201ENSMUST00000189183 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29382-201ENSMUST00000189549 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29377-205ENSMUST00000189603 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28327-201ENSMUST00000189638 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28790-201ENSMUST00000189642 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28907-201ENSMUST00000189700 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29586-207ENSMUST00000189745 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29115-201ENSMUST00000189870 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28366-201ENSMUST00000190147 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29212-201ENSMUST00000190384 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29533-201ENSMUST00000190403 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28162-201ENSMUST00000190545 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29030-201ENSMUST00000190848 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28742-201ENSMUST00000191001 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28899-201ENSMUST00000191161 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29567-201ENSMUST00000191188 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28222-201ENSMUST00000191210 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28776-201ENSMUST00000191282 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29306-201ENSMUST00000191366 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29618-201ENSMUST00000191423 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28136-210ENSMUST00000191432 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29251-201ENSMUST00000191480 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28658-201ENSMUST00000191532 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm32180-201ENSMUST00000192415 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm30598-201ENSMUST00000192620 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm37369-201ENSMUST00000194179 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm37627-201ENSMUST00000194585 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm34274-201ENSMUST00000195825 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm20940-201ENSMUST00000197308 360 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm8539-201ENSMUST00000199822 501 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm42472-201ENSMUST00000201626 859 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm44590-201ENSMUST00000206161 391 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm5324-201ENSMUST00000208115 476 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm45157-201ENSMUST00000208729 401 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC4.85□□□□□ -1.63
Sdc1P18828 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC4.85□□□□□ -1.63
Sdc1P18828 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 AC157571.1-201ENSMUST00000222014 520 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 CT009495.1-201ENSMUST00000224221 862 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm23927-201ENSMUST00000082466 215 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Sdc1P18828 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sdc1P18828 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Sdc1P18828 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sdc1P18828 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm43900-201ENSMUST00000204868 2669 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 AC156031.1-201ENSMUST00000217288 2555 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm37755-201ENSMUST00000195880 2179 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm11516-201ENSMUST00000118450 1582 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm22781-201ENSMUST00000104083 137 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm26016-201ENSMUST00000104403 129 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm8692-201ENSMUST00000118102 438 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm15400-201ENSMUST00000118944 601 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
Sdc1P18828 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms