Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm28061-201ENSMUST00000189085 807 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm18036-201ENSMUST00000195256 272 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm7733-201ENSMUST00000199038 919 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm7181-201ENSMUST00000202197 434 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm10709-201ENSMUST00000213318 480 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col1a1P11087 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Col1a1P11087 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col1a1P11087 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm25758-201ENSMUST00000103987 129 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 Vis1-201ENSMUST00000183957 201 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Mir7687-201ENSMUST00000184722 59 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC7.06□□□□□ -1.28
Col1a1P11087 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 n-R5s161-201ENSMUST00000083728 114 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.06□□□□□ -1.28
Col1a1P11087 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.06□□□□□ -1.28
Col1a1P11087 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col1a1P11087 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Col1a1P11087 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col1a1P11087 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm13866-201ENSMUST00000118901 968 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Gm13740-201ENSMUST00000120590 310 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Gm6305-201ENSMUST00000121027 1012 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Col1a1P11087 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm23164-201ENSMUST00000175084 111 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Gm42522-201ENSMUST00000196071 255 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.05□□□□□ -1.28
Col1a1P11087 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm43981-201ENSMUST00000203285 1467 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm18007-201ENSMUST00000205019 844 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col1a1P11087 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
Col1a1P11087 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col1a1P11087 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.05□□□□□ -1.28
Col1a1P11087 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
Col1a1P11087 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col1a1P11087 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col1a1P11087 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.05□□□□□ -1.28
Col1a1P11087 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col1a1P11087 Mir193b-201ENSMUST00000103784 79 ntBASIC7.04□□□□□ -1.28
Col1a1P11087 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col1a1P11087 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms