Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15237-201ENSMUST00000122104 469 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm25065-201ENSMUST00000177914 132 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm25891-201ENSMUST00000180050 132 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm37430-201ENSMUST00000193039 196 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm31211-201ENSMUST00000199170 253 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm8863-201ENSMUST00000216630 926 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm9292-201ENSMUST00000222008 710 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Cma2-202ENSMUST00000228263 857 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm14331-201ENSMUST00000120396 409 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm10177-201ENSMUST00000160052 444 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm16269-201ENSMUST00000160532 409 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm17934-201ENSMUST00000192818 422 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm45156-201ENSMUST00000207255 439 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm44809-201ENSMUST00000208305 993 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Mir3068-201ENSMUST00000083004 136 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.55□□□□□ -1.36
Chmp6P0C0A3 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm16074-201ENSMUST00000119524 444 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms