Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm28847-201ENSMUST00000186778 700 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm9332-201ENSMUST00000198431 730 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm6049-201ENSMUST00000222369 458 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 AC154636.1-201ENSMUST00000223226 126 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 AV026068-231ENSMUST00000225862 482 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm6776-201ENSMUST00000057752 900 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm10064-201ENSMUST00000071235 399 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Mir188-201ENSMUST00000083464 68 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col4a1P02463 AC144733.2-201ENSMUST00000222552 2292 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.27□□□□□ -1.25
Col4a1P02463 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Col4a1P02463 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Col4a1P02463 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Col4a1P02463 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col4a1P02463 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col4a1P02463 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Col4a1P02463 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Gm14512-201ENSMUST00000117924 230 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Gm11990-201ENSMUST00000121505 897 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Gm26167-201ENSMUST00000158423 253 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.26□□□□□ -1.25
Col4a1P02463 Gm37932-201ENSMUST00000192258 1167 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Gm38451-201ENSMUST00000208329 2646 ntBASIC7.26□□□□□ -1.25
Col4a1P02463 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col4a1P02463 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
Col4a1P02463 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.26□□□□□ -1.25
Col4a1P02463 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Gm37880-201ENSMUST00000192216 3257 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 AC112142.1-203ENSMUST00000228670 2472 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.25□□□□□ -1.25
Col4a1P02463 Gm23250-201ENSMUST00000157444 267 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Gm8604-201ENSMUST00000183150 965 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC7.25□□□□□ -1.25
Col4a1P02463 Gm3257-201ENSMUST00000207217 675 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col4a1P02463 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.25□□□□□ -1.25
Col4a1P02463 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col4a1P02463 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col4a1P02463 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Col4a1P02463 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Col4a1P02463 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col4a1P02463 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Col4a1P02463 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.25□□□□□ -1.25
Col4a1P02463 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.25□□□□□ -1.25
Col4a1P02463 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col4a1P02463 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col4a1P02463 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col4a1P02463 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col4a1P02463 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms