Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm14267-201ENSMUST00000119751 496 ntBASIC6.06□□□□□ -1.44
CopeO89079 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.06□□□□□ -1.44
CopeO89079 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CopeO89079 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.06□□□□□ -1.44
CopeO89079 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.06□□□□□ -1.44
CopeO89079 Gm18427-201ENSMUST00000195422 515 ntBASIC6.06□□□□□ -1.44
CopeO89079 Gm44316-201ENSMUST00000199274 97 ntBASIC6.06□□□□□ -1.44
CopeO89079 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.06□□□□□ -1.44
CopeO89079 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CopeO89079 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.06□□□□□ -1.44
CopeO89079 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.06□□□□□ -1.44
CopeO89079 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.06□□□□□ -1.44
CopeO89079 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.06□□□□□ -1.44
CopeO89079 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.06□□□□□ -1.44
CopeO89079 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CopeO89079 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CopeO89079 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CopeO89079 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.06□□□□□ -1.44
CopeO89079 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.06□□□□□ -1.44
CopeO89079 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.06□□□□□ -1.44
CopeO89079 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
CopeO89079 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CopeO89079 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CopeO89079 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.06□□□□□ -1.44
CopeO89079 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CopeO89079 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.06□□□□□ -1.44
CopeO89079 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.05□□□□□ -1.44
CopeO89079 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.05□□□□□ -1.44
CopeO89079 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.05□□□□□ -1.44
CopeO89079 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.05□□□□□ -1.44
CopeO89079 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CopeO89079 Gm15400-201ENSMUST00000118944 601 ntBASIC6.05□□□□□ -1.44
CopeO89079 Gm12396-201ENSMUST00000121600 306 ntBASIC6.05□□□□□ -1.44
CopeO89079 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.05□□□□□ -1.44
CopeO89079 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CopeO89079 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.05□□□□□ -1.44
CopeO89079 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.05□□□□□ -1.44
CopeO89079 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CopeO89079 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CopeO89079 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.05□□□□□ -1.44
CopeO89079 Gm2367-201ENSMUST00000192374 472 ntBASIC6.05□□□□□ -1.44
CopeO89079 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.05□□□□□ -1.44
CopeO89079 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.05□□□□□ -1.44
CopeO89079 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.05□□□□□ -1.44
CopeO89079 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.05□□□□□ -1.44
CopeO89079 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.05□□□□□ -1.44
CopeO89079 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.05□□□□□ -1.44
CopeO89079 Gm29486-201ENSMUST00000088648 372 ntBASIC6.05□□□□□ -1.44
CopeO89079 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.05□□□□□ -1.44
CopeO89079 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CopeO89079 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
CopeO89079 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CopeO89079 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.05□□□□□ -1.44
CopeO89079 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CopeO89079 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.04□□□□□ -1.44
CopeO89079 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.04□□□□□ -1.44
CopeO89079 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.04□□□□□ -1.44
CopeO89079 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CopeO89079 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.04□□□□□ -1.44
CopeO89079 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CopeO89079 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.04□□□□□ -1.44
CopeO89079 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.04□□□□□ -1.44
CopeO89079 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.04□□□□□ -1.44
CopeO89079 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.04□□□□□ -1.44
CopeO89079 Gm25904-201ENSMUST00000158491 143 ntBASIC6.04□□□□□ -1.44
CopeO89079 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.04□□□□□ -1.44
CopeO89079 Mir6972-201ENSMUST00000184774 64 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 1405 ms