Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Hmgb3O54879 Gm43719-201ENSMUST00000200088 2199 ntBASIC4.84□□□□□ -1.64
Hmgb3O54879 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Hmgb3O54879 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Hmgb3O54879 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Hmgb3O54879 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Hmgb3O54879 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC4.84□□□□□ -1.64
Hmgb3O54879 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Hmgb3O54879 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 AC159624.1-201ENSMUST00000217762 1344 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm9144-201ENSMUST00000101625 1008 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm24790-201ENSMUST00000104285 132 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm8312-201ENSMUST00000119380 618 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm13626-201ENSMUST00000119435 402 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm7212-201ENSMUST00000120817 348 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm15750-201ENSMUST00000120970 616 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm12399-201ENSMUST00000121475 446 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm14503-201ENSMUST00000130337 1164 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm23756-201ENSMUST00000157582 114 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm23077-201ENSMUST00000157854 116 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm15740-201ENSMUST00000159703 1292 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm24157-201ENSMUST00000175265 111 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm25244-201ENSMUST00000178089 132 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm8367-201ENSMUST00000186145 887 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm29214-201ENSMUST00000190216 570 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm29551-201ENSMUST00000190913 698 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm7626-201ENSMUST00000195801 353 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm44361-201ENSMUST00000197960 94 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm42776-201ENSMUST00000198031 406 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm29736-201ENSMUST00000198189 385 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm42938-201ENSMUST00000198414 1072 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm42581-201ENSMUST00000201774 966 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm45473-201ENSMUST00000211452 616 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm19324-201ENSMUST00000213229 1169 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Mif-ps7-201ENSMUST00000223357 327 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 AC107663.1-201ENSMUST00000224257 468 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 CT009713.1-201ENSMUST00000224828 853 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 AC158750.1-201ENSMUST00000226163 634 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm15732-201ENSMUST00000079794 480 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm10205-201ENSMUST00000087431 234 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 CT025604.1-201ENSMUST00000221111 3436 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Hmgb3O54879 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Hmgb3O54879 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm43627-201ENSMUST00000197119 2299 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC4.83□□□□□ -1.64
Hmgb3O54879 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.82□□□□□ -1.64
Hmgb3O54879 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hmgb3O54879 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms