Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Pcdh1F7BJK1 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Pcdh1F7BJK1 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Pcdh1F7BJK1 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.15□□□□□ -1.43
Pcdh1F7BJK1 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Pcdh1F7BJK1 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Pcdh1F7BJK1 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm24986-201ENSMUST00000104452 132 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm15379-201ENSMUST00000121224 648 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm16588-201ENSMUST00000162889 355 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm20430-201ENSMUST00000172474 207 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm24465-201ENSMUST00000178398 107 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm8609-201ENSMUST00000182967 998 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm37098-201ENSMUST00000192290 244 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm36965-201ENSMUST00000193797 394 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm38328-201ENSMUST00000195582 317 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm43160-201ENSMUST00000196453 421 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm43232-201ENSMUST00000201346 364 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm42573-201ENSMUST00000202327 478 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm44972-201ENSMUST00000206419 406 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm7499-201ENSMUST00000210423 813 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm17997-201ENSMUST00000211801 840 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 AC129208.2-201ENSMUST00000228506 320 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm9788-201ENSMUST00000057038 906 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh1F7BJK1 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm17170-201ENSMUST00000112785 316 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm15054-201ENSMUST00000117393 281 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm8644-201ENSMUST00000118619 596 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm5943-201ENSMUST00000119458 459 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm11420-201ENSMUST00000120047 402 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm14360-201ENSMUST00000120670 393 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm12321-201ENSMUST00000121485 804 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm12807-201ENSMUST00000121546 962 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm3221-201ENSMUST00000164869 440 ntBASIC6.13□□□□□ -1.43
Pcdh1F7BJK1 Gm6472-201ENSMUST00000178147 651 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms