Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm22231-201ENSMUST00000101027 73 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm12643-201ENSMUST00000116078 374 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm14842-201ENSMUST00000119577 269 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm4845-201ENSMUST00000179202 562 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm44316-201ENSMUST00000199274 97 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm43772-201ENSMUST00000202052 379 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm9088-201ENSMUST00000220237 508 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Mir3068-201ENSMUST00000083004 136 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Gm22351-201ENSMUST00000083925 107 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.98□□□□□ -1.45
H2afb2S4R1M3 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
H2afb2S4R1M3 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm8317-201ENSMUST00000121261 471 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm26595-201ENSMUST00000181585 484 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Mir6362-201ENSMUST00000184329 107 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm28064-201ENSMUST00000185639 858 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm19739-201ENSMUST00000195941 153 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm43762-201ENSMUST00000201521 295 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm23624-201ENSMUST00000082463 321 ntBASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
H2afb2S4R1M3 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.96□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms