Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm21041-201ENSMUST00000214829 823 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm34005-201ENSMUST00000215834 282 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Mir466n-201ENSMUST00000104798 94 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm13552-201ENSMUST00000118837 417 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm12955-201ENSMUST00000119689 957 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm14749-201ENSMUST00000121269 333 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm25845-201ENSMUST00000122588 310 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm22199-201ENSMUST00000122660 126 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm24635-201ENSMUST00000122712 128 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm24438-201ENSMUST00000157893 115 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm17129-201ENSMUST00000168168 505 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm4246-201ENSMUST00000172822 216 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm27036-201ENSMUST00000182465 980 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm19172-201ENSMUST00000203170 1246 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm45400-201ENSMUST00000211603 653 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm18557-201ENSMUST00000218710 433 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 AC116589.1-201ENSMUST00000220634 327 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm46317-201ENSMUST00000221103 393 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm26072-201ENSMUST00000083135 107 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm24254-201ENSMUST00000083702 104 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim39Q9ESN2 Gm13100-201ENSMUST00000117157 1439 ntBASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.9□□□□□ -1.31
Trim39Q9ESN2 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Trim39Q9ESN2 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms