Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Clrn1Q8K445 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Clrn1Q8K445 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Clrn1Q8K445 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.21□□□□□ -1.41
Clrn1Q8K445 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Clrn1Q8K445 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Clrn1Q8K445 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Clrn1Q8K445 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm25093-201ENSMUST00000103993 132 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm9435-201ENSMUST00000120379 877 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm12630-201ENSMUST00000121575 784 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm12540-201ENSMUST00000121938 319 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm12778-201ENSMUST00000122341 333 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm23888-201ENSMUST00000122690 253 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm22186-201ENSMUST00000157822 122 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm23762-201ENSMUST00000158348 106 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm17377-201ENSMUST00000165184 207 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm20432-201ENSMUST00000173716 250 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm22698-201ENSMUST00000175375 108 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm21756-201ENSMUST00000178380 930 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm21405-201ENSMUST00000179024 930 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm28637-201ENSMUST00000179424 345 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm9556-201ENSMUST00000182938 940 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Mir6337-201ENSMUST00000184194 105 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm27219-201ENSMUST00000184633 742 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm19480-201ENSMUST00000185547 667 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm21191-201ENSMUST00000186484 930 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm18342-201ENSMUST00000186987 694 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm2427-201ENSMUST00000189121 881 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm21489-201ENSMUST00000189668 818 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm29503-201ENSMUST00000191044 930 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm43582-201ENSMUST00000196149 343 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm43308-201ENSMUST00000197236 373 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm9367-201ENSMUST00000205703 546 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm32983-201ENSMUST00000208500 505 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm17997-201ENSMUST00000211801 840 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm2531-201ENSMUST00000075609 512 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Mir425-201ENSMUST00000083645 85 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Thap6-201ENSMUST00000191860 3151 ntBASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clrn1Q8K445 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm5601-201ENSMUST00000118909 972 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm14614-201ENSMUST00000119873 384 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm11407-201ENSMUST00000120362 1058 ntBASIC6.2□□□□□ -1.42
Clrn1Q8K445 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms