Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm14098-201ENSMUST00000119295 623 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm13818-201ENSMUST00000119441 511 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm22326-201ENSMUST00000158897 351 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Scarna10-201ENSMUST00000158992 325 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm2976-201ENSMUST00000160362 513 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm2367-201ENSMUST00000192374 472 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm17934-201ENSMUST00000192818 422 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm8869-201ENSMUST00000195222 947 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm6850-201ENSMUST00000210031 530 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45733-201ENSMUST00000212988 437 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm5928-201ENSMUST00000221839 466 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 CT009539.1-201ENSMUST00000226465 220 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 AC137950.3-201ENSMUST00000228250 246 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc28bQ8CEG5 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc28bQ8CEG5 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc28bQ8CEG5 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc28bQ8CEG5 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm24284-201ENSMUST00000104240 142 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm15750-201ENSMUST00000120970 616 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm12778-201ENSMUST00000122341 333 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm23964-201ENSMUST00000157966 107 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm3140-201ENSMUST00000163523 481 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm23968-201ENSMUST00000175047 125 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm28929-201ENSMUST00000185330 1193 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm8367-201ENSMUST00000186145 887 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm29551-201ENSMUST00000190913 698 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm43459-201ENSMUST00000202093 331 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Gm32899-201ENSMUST00000219694 207 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 AC133598.2-201ENSMUST00000224302 624 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Ccdc28bQ8CEG5 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28bQ8CEG5 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms