Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Nup88Q8CEC0 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Nup88Q8CEC0 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Nup88Q8CEC0 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Nup88Q8CEC0 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Nup88Q8CEC0 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm15901-201ENSMUST00000117663 941 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Mir5110-201ENSMUST00000175537 87 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm5947-201ENSMUST00000179156 714 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm5645-201ENSMUST00000179597 714 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm38097-201ENSMUST00000192936 439 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm3544-201ENSMUST00000196129 305 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm32158-201ENSMUST00000200135 404 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm45156-201ENSMUST00000207255 439 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm9237-201ENSMUST00000221499 548 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup88Q8CEC0 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm45179-201ENSMUST00000208452 4337 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm25415-201ENSMUST00000104220 132 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm13626-201ENSMUST00000119435 402 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm14515-201ENSMUST00000121327 216 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm14587-201ENSMUST00000121714 658 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm23553-201ENSMUST00000157817 295 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm23894-201ENSMUST00000158107 313 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm7152-201ENSMUST00000163570 605 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Mir6361-201ENSMUST00000185079 101 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm18839-201ENSMUST00000204292 670 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm6009-201ENSMUST00000210848 280 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 n-R5s180-201ENSMUST00000082770 106 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.16□□□□□ -1.26
Nup88Q8CEC0 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms