Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm7189-201ENSMUST00000119811 429 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm22276-201ENSMUST00000122469 129 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Mir1960-201ENSMUST00000157488 78 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm26486-201ENSMUST00000158021 110 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm18833-201ENSMUST00000173218 862 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm22655-201ENSMUST00000174949 96 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm23632-201ENSMUST00000175289 125 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Mir6971-201ENSMUST00000183497 63 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm28011-201ENSMUST00000184097 175 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm43501-201ENSMUST00000202513 107 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm18628-201ENSMUST00000220584 475 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm19540-201ENSMUST00000221843 810 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 AC136019.1-201ENSMUST00000226503 1412 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm14054-201ENSMUST00000120744 704 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm27030-201ENSMUST00000182551 464 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Mir7020-201ENSMUST00000183787 70 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm29519-201ENSMUST00000186994 398 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm36939-201ENSMUST00000194889 439 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm5853-201ENSMUST00000197183 632 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm18103-201ENSMUST00000216621 779 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm19186-201ENSMUST00000219922 333 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Vps53Q8CCB4 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Vps53Q8CCB4 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm42992-201ENSMUST00000197043 6836 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm24434-201ENSMUST00000104081 132 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm24382-201ENSMUST00000122698 107 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Mir7211-201ENSMUST00000184071 63 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm27460-201ENSMUST00000184213 100 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.27□□□□□ -1.25
Vps53Q8CCB4 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms