Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Katnal2-201ENSMUST00000026486 1674 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Nt5c1b-211ENSMUST00000218339 1843 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Nt5c1b-201ENSMUST00000002456 1849 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Polr3k-201ENSMUST00000039551 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm12108-201ENSMUST00000145338 2589 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm24433-201ENSMUST00000104080 133 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Mir883a-201ENSMUST00000104824 76 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm11879-201ENSMUST00000121885 702 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Defa-ps12-201ENSMUST00000122353 193 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm3084-201ENSMUST00000169967 598 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm29665-201ENSMUST00000191457 528 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm43601-201ENSMUST00000196294 945 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Igkv11-114-201ENSMUST00000200013 346 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm44091-201ENSMUST00000205212 649 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm45002-201ENSMUST00000208045 120 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm4780-201ENSMUST00000213206 1242 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 AC166574.3-201ENSMUST00000226725 367 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm23055-201ENSMUST00000082805 94 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm39041-201ENSMUST00000205557 3902 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trim35Q8C006 Fam35a-201ENSMUST00000111917 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm18876-201ENSMUST00000219985 1849 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm5653-201ENSMUST00000223393 1337 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Gm26575-201ENSMUST00000181714 2232 ntBASIC9.03□□□□□ -0.96
Trim35Q8C006 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim35Q8C006 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC9.02□□□□□ -0.96
Trim35Q8C006 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trim35Q8C006 Gm44835-201ENSMUST00000205544 3181 ntBASIC9.02□□□□□ -0.96
Trim35Q8C006 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Trim35Q8C006 Morc3-202ENSMUST00000201097 2918 ntTSL 5 BASIC9.02□□□□□ -0.96
Trim35Q8C006 Gm44541-201ENSMUST00000207837 2907 ntBASIC9.02□□□□□ -0.96
Trim35Q8C006 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Nol11-202ENSMUST00000106757 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Ighv1-7-201ENSMUST00000103496 388 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm15026-201ENSMUST00000119219 458 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm14227-201ENSMUST00000119431 629 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm13735-201ENSMUST00000120217 670 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm12654-201ENSMUST00000120387 587 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm11223-201ENSMUST00000120560 450 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm13973-201ENSMUST00000121371 894 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 1810021B22Rik-205ENSMUST00000162579 544 ntTSL 2 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm7244-201ENSMUST00000164658 455 ntBASIC9.02□□□□□ -0.97
Trim35Q8C006 Kank3-204ENSMUST00000173789 783 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm11239-202ENSMUST00000179977 1080 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trim35Q8C006 A330094K24Rik-201ENSMUST00000180530 1027 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim35Q8C006 Gm26964-201ENSMUST00000182516 832 ntTSL 2 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms