Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm45633-201ENSMUST00000210669 3253 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 AC107742.1-201ENSMUST00000227769 1390 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm13866-201ENSMUST00000118901 968 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm11990-201ENSMUST00000121505 897 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm25439-201ENSMUST00000158280 131 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm44316-201ENSMUST00000199274 97 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm4742-201ENSMUST00000200261 771 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 AC167013.5-201ENSMUST00000227597 2947 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm13899-201ENSMUST00000121519 1255 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm25445-201ENSMUST00000158996 299 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm37203-201ENSMUST00000191618 385 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm37341-201ENSMUST00000194680 371 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm43779-201ENSMUST00000196691 829 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm42619-201ENSMUST00000197564 1136 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm19116-201ENSMUST00000218592 642 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 AC132384.3-201ENSMUST00000219709 472 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Mir298-201ENSMUST00000083476 82 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Mir375-201ENSMUST00000083682 64 ntBASIC8.47□□□□□ -1.05
Usp47Q8BY87 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Usp47Q8BY87 Gm37086-201ENSMUST00000193082 3452 ntBASIC8.46□□□□□ -1.05
Usp47Q8BY87 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Usp47Q8BY87 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Usp47Q8BY87 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Usp47Q8BY87 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Usp47Q8BY87 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.46□□□□□ -1.05
Usp47Q8BY87 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.46□□□□□ -1.05
Usp47Q8BY87 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 AC174459.1-201ENSMUST00000224476 1943 ntBASIC8.46□□□□□ -1.06
Usp47Q8BY87 Gm6382-201ENSMUST00000118873 942 ntBASIC8.46□□□□□ -1.06
Usp47Q8BY87 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Gm26106-201ENSMUST00000157254 228 ntBASIC8.46□□□□□ -1.06
Usp47Q8BY87 Gm16531-201ENSMUST00000180658 967 ntBASIC8.46□□□□□ -1.06
Usp47Q8BY87 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Usp47Q8BY87 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp47Q8BY87 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms