Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm12465-201ENSMUST00000118591 300 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm26254-201ENSMUST00000122491 118 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm7281-201ENSMUST00000160010 543 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm44370-201ENSMUST00000175436 112 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Mir7685-201ENSMUST00000183555 62 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm37641-201ENSMUST00000193837 239 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm37002-201ENSMUST00000194560 373 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm37845-201ENSMUST00000194977 355 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm18600-201ENSMUST00000207205 505 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 AC102352.1-201ENSMUST00000224187 582 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm25799-201ENSMUST00000082643 107 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.39□□□□□ -1.39
Sp140Q6NSQ5 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm14098-201ENSMUST00000119295 623 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm11446-201ENSMUST00000121319 866 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm16260-201ENSMUST00000155141 304 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm23762-201ENSMUST00000158348 106 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm20454-201ENSMUST00000172713 221 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm20549-201ENSMUST00000174804 429 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm22548-201ENSMUST00000174899 78 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm27601-201ENSMUST00000184794 127 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm37477-201ENSMUST00000195215 884 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm17824-201ENSMUST00000197690 805 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm8479-201ENSMUST00000203825 718 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm7171-201ENSMUST00000177413 1349 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.38□□□□□ -1.39
Sp140Q6NSQ5 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sp140Q6NSQ5 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms