Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Upf3bQ3ULL6 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.46□□□□□ -1.37
Upf3bQ3ULL6 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm12890-201ENSMUST00000120885 373 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm15237-201ENSMUST00000122104 469 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm23386-201ENSMUST00000158585 144 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm20480-201ENSMUST00000173953 250 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm6009-201ENSMUST00000210848 280 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm45724-201ENSMUST00000213031 420 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm9237-201ENSMUST00000221499 548 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm22684-201ENSMUST00000082849 132 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.46□□□□□ -1.38
Upf3bQ3ULL6 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm8501-201ENSMUST00000117684 432 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm13493-201ENSMUST00000120318 493 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm13578-201ENSMUST00000120849 590 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm14515-201ENSMUST00000121327 216 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm7931-201ENSMUST00000121537 271 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm23757-201ENSMUST00000158353 100 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm27512-201ENSMUST00000175328 126 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm28973-201ENSMUST00000189310 613 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm37774-201ENSMUST00000194401 245 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm8290-201ENSMUST00000218202 477 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.45□□□□□ -1.38
Upf3bQ3ULL6 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm26410-201ENSMUST00000157670 261 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms