Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm14356-201ENSMUST00000118322 869 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm14098-201ENSMUST00000119295 623 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm25445-201ENSMUST00000158996 299 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm6541-201ENSMUST00000165542 561 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm20549-201ENSMUST00000174804 429 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm8419-201ENSMUST00000189886 412 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm43436-201ENSMUST00000199308 147 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm5306-201ENSMUST00000203325 757 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm46223-201ENSMUST00000215196 675 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm18409-202ENSMUST00000220105 529 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm26163-201ENSMUST00000083792 178 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm14115-201ENSMUST00000119242 482 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm12094-201ENSMUST00000121781 472 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm25363-201ENSMUST00000158850 245 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm7745-201ENSMUST00000182235 973 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Mir6992-201ENSMUST00000183342 109 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Mir6362-201ENSMUST00000184329 107 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm29745-201ENSMUST00000198005 687 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm44382-201ENSMUST00000198683 122 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm44768-201ENSMUST00000205719 393 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm9237-201ENSMUST00000221499 548 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm22300-201ENSMUST00000082661 126 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.31□□□□□ -1.56
Nkx3-1P97436 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.31□□□□□ -1.56
Nkx3-1P97436 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nkx3-1P97436 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.3□□□□□ -1.56
Nkx3-1P97436 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nkx3-1P97436 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.3□□□□□ -1.56
Nkx3-1P97436 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms