Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3f3aP84244 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3f3aP84244 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3f3aP84244 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
H3f3aP84244 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3f3aP84244 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.42□□□□□ -1.54
H3f3aP84244 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
H3f3aP84244 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
H3f3aP84244 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
H3f3aP84244 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.42□□□□□ -1.54
H3f3aP84244 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
H3f3aP84244 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
H3f3aP84244 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC5.42□□□□□ -1.54
H3f3aP84244 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.42□□□□□ -1.54
H3f3aP84244 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm23311-201ENSMUST00000104152 134 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Mir1900-201ENSMUST00000122714 78 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm17137-202ENSMUST00000165729 957 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
H3f3aP84244 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm28973-201ENSMUST00000189310 613 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm28586-201ENSMUST00000189857 456 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm4083-201ENSMUST00000207158 451 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm44809-201ENSMUST00000208305 993 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm10095-201ENSMUST00000222765 483 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm24041-201ENSMUST00000083115 156 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
H3f3aP84244 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.41□□□□□ -1.54
H3f3aP84244 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
H3f3aP84244 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
H3f3aP84244 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
H3f3aP84244 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H3f3aP84244 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
H3f3aP84244 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
H3f3aP84244 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
H3f3aP84244 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H3f3aP84244 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm9005-201ENSMUST00000119908 607 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm12308-201ENSMUST00000120440 389 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm26346-201ENSMUST00000157525 329 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm25387-201ENSMUST00000157813 132 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm26167-201ENSMUST00000158423 253 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.4□□□□□ -1.54
H3f3aP84244 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm21542-201ENSMUST00000182307 993 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm8183-201ENSMUST00000183134 980 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H3f3aP84244 Gm29519-201ENSMUST00000186994 398 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm35013-201ENSMUST00000197218 832 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm6009-201ENSMUST00000210848 280 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.4□□□□□ -1.54
H3f3aP84244 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.4□□□□□ -1.54
H3f3aP84244 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.4□□□□□ -1.54
H3f3aP84244 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms