Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Gm44697-201ENSMUST00000207756 1679 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Mup-ps19-201ENSMUST00000120390 519 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Gm16179-201ENSMUST00000120685 373 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Gm11925-201ENSMUST00000121375 535 ntBASIC9.24□□□□□ -0.93
Cux1P53564 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC9.24□□□□□ -0.93
Cux1P53564 Gm23224-201ENSMUST00000158122 271 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Gm22261-201ENSMUST00000158691 324 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Mir5112-201ENSMUST00000174897 60 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC9.24□□□□□ -0.93
Cux1P53564 Gm44184-201ENSMUST00000204290 132 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Gm8039-201ENSMUST00000204758 712 ntBASIC9.24□□□□□ -0.93
Cux1P53564 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Cux1P53564 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cux1P53564 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC9.24□□□□□ -0.93
Cux1P53564 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cux1P53564 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Cux1P53564 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Cux1P53564 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
Cux1P53564 Ear-ps2-201ENSMUST00000100689 466 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Gm11908-201ENSMUST00000117755 347 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Gm13338-201ENSMUST00000120235 361 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Gm26489-201ENSMUST00000157880 264 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Cux1P53564 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Gm38291-201ENSMUST00000193671 259 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Gm44132-201ENSMUST00000205142 151 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Cux1P53564 AC123665.4-201ENSMUST00000228790 249 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
Cux1P53564 Gm22807-201ENSMUST00000082737 129 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Cux1P53564 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Gm3608-201ENSMUST00000086725 2858 ntBASIC9.23□□□□□ -0.93
Cux1P53564 AC153143.1-201ENSMUST00000222966 1340 ntBASIC9.23□□□□□ -0.93
Cux1P53564 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cux1P53564 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cux1P53564 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Gm43328-201ENSMUST00000198544 1434 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cux1P53564 Gm37530-201ENSMUST00000191759 4932 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Gm6427-201ENSMUST00000118721 979 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Gm15660-201ENSMUST00000118997 478 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Atf1-ps-201ENSMUST00000120608 810 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Gm22529-201ENSMUST00000158817 123 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC9.22□□□□□ -0.93
Cux1P53564 Gm38384-201ENSMUST00000195413 1122 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Gm9332-201ENSMUST00000198431 730 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Gm44316-201ENSMUST00000199274 97 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC9.22□□□□□ -0.93
Cux1P53564 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC9.22□□□□□ -0.93
Cux1P53564 Mir134-201ENSMUST00000083492 71 ntBASIC9.22□□□□□ -0.93
Cux1P53564 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cux1P53564 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Gm37216-201ENSMUST00000193817 3478 ntBASIC9.22□□□□□ -0.93
Cux1P53564 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Cux1P53564 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cux1P53564 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cux1P53564 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cux1P53564 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cux1P53564 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms