Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm26422-201ENSMUST00000104276 132 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm12468-201ENSMUST00000116189 404 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm15901-201ENSMUST00000117663 941 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm13877-201ENSMUST00000120614 417 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm3810-201ENSMUST00000122413 476 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm25395-201ENSMUST00000157343 272 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm8715-201ENSMUST00000162728 531 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm23633-201ENSMUST00000175293 119 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm9285-201ENSMUST00000177691 697 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm27156-201ENSMUST00000184589 754 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm27299-201ENSMUST00000184593 103 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm44896-201ENSMUST00000206190 772 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm32983-201ENSMUST00000208500 505 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 n-R5s95-201ENSMUST00000082684 118 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm45201-201ENSMUST00000207187 2679 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm25344-201ENSMUST00000104503 132 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm2178-201ENSMUST00000104927 357 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm15216-201ENSMUST00000118058 277 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm5601-201ENSMUST00000118909 972 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm6654-201ENSMUST00000118950 348 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm11517-201ENSMUST00000119491 387 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm5166-201ENSMUST00000121332 573 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm7281-201ENSMUST00000160010 543 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm8609-201ENSMUST00000182967 998 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Mir6374-201ENSMUST00000184003 107 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm27295-201ENSMUST00000184264 153 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Mir6987-201ENSMUST00000184789 73 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm28060-201ENSMUST00000191554 189 ntBASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx2-1P50220 Gm37270-201ENSMUST00000194277 330 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms