Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm24048-201ENSMUST00000102411 106 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm7670-201ENSMUST00000121272 641 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm29111-201ENSMUST00000188823 696 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm28061-201ENSMUST00000189085 807 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm28584-201ENSMUST00000191489 696 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm38138-201ENSMUST00000193274 696 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm37991-201ENSMUST00000194297 696 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cxcl12P40224 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Cxcl12P40224 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC6.32□□□□□ -1.4
Cxcl12P40224 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cxcl12P40224 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cxcl12P40224 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cxcl12P40224 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cxcl12P40224 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.31□□□□□ -1.4
Cxcl12P40224 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.31□□□□□ -1.4
Cxcl12P40224 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Cxcl12P40224 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms