Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Col18a1P39061 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm37005-201ENSMUST00000193281 1164 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Igkv12-47-201ENSMUST00000196961 356 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col18a1P39061 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col18a1P39061 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Col18a1P39061 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm38387-201ENSMUST00000191945 2577 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Col18a1P39061 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.17□□□□□ -1.1
Col18a1P39061 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm24860-201ENSMUST00000158457 276 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm5946-201ENSMUST00000182340 970 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Col18a1P39061 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm38201-201ENSMUST00000192143 387 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm6590-201ENSMUST00000203343 687 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 AC125464.1-201ENSMUST00000228013 512 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 n-R5s89-201ENSMUST00000083532 104 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col18a1P39061 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col18a1P39061 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm14253-201ENSMUST00000122112 639 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm25655-201ENSMUST00000158465 290 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm27855-201ENSMUST00000184122 128 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28604-201ENSMUST00000186629 484 ntBASIC8.17□□□□□ -1.1
Col18a1P39061 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col18a1P39061 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms