Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col2a1P28481 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col2a1P28481 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Col2a1P28481 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Col2a1P28481 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.84□□□□□ -1.31
Col2a1P28481 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col2a1P28481 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm13451-201ENSMUST00000117649 592 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm25152-201ENSMUST00000157117 114 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm37024-201ENSMUST00000192224 868 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 Gm45026-201ENSMUST00000205292 833 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 Gm31166-201ENSMUST00000209326 288 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm23624-201ENSMUST00000082463 321 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.84□□□□□ -1.31
Col2a1P28481 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Col2a1P28481 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.84□□□□□ -1.31
Col2a1P28481 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col2a1P28481 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Col2a1P28481 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Col2a1P28481 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.83□□□□□ -1.32
Col2a1P28481 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Col2a1P28481 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Mir1970-201ENSMUST00000157839 104 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm8185-201ENSMUST00000160999 669 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Vis1-201ENSMUST00000183957 201 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Mir8097-201ENSMUST00000185150 119 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm29124-201ENSMUST00000186576 452 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm8826-201ENSMUST00000193161 948 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Gm20770-201ENSMUST00000193474 694 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm9480-201ENSMUST00000198038 616 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm17994-201ENSMUST00000209260 533 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col2a1P28481 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col2a1P28481 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.83□□□□□ -1.32
Col2a1P28481 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col2a1P28481 Gm37057-201ENSMUST00000192624 1916 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Col2a1P28481 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.82□□□□□ -1.32
Col2a1P28481 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col2a1P28481 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col2a1P28481 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.82□□□□□ -1.32
Col2a1P28481 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.82□□□□□ -1.32
Col2a1P28481 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col2a1P28481 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col2a1P28481 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Col2a1P28481 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col2a1P28481 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col2a1P28481 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms