Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.87□□□□□ -1.63
Sdc1P18828 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sdc1P18828 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sdc1P18828 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm15224-201ENSMUST00000120501 388 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm11369-201ENSMUST00000120812 318 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC4.86□□□□□ -1.63
Sdc1P18828 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm24685-201ENSMUST00000157764 285 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm23279-201ENSMUST00000157912 97 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Sdc1P18828 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm22852-201ENSMUST00000177899 101 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm5430-201ENSMUST00000182525 915 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.86□□□□□ -1.63
Sdc1P18828 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm28341-201ENSMUST00000190883 472 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm7412-201ENSMUST00000191692 605 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm17934-201ENSMUST00000192818 422 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm37719-201ENSMUST00000194615 292 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm44075-201ENSMUST00000204208 216 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm16475-202ENSMUST00000209033 528 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.86□□□□□ -1.63
Sdc1P18828 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm8672-201ENSMUST00000221200 332 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm32526-201ENSMUST00000221878 981 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 AC154515.3-201ENSMUST00000225081 1159 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sdc1P18828 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sdc1P18828 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sdc1P18828 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sdc1P18828 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sdc1P18828 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Gm19125-201ENSMUST00000188408 1383 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.86□□□□□ -1.63
Sdc1P18828 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sdc1P18828 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.86□□□□□ -1.63
Sdc1P18828 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sdc1P18828 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm11970-201ENSMUST00000116105 320 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Snord88a-201ENSMUST00000116723 90 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm14603-201ENSMUST00000121275 448 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm13214-201ENSMUST00000122137 408 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Sdc1P18828 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm16125-201ENSMUST00000159003 339 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sdc1P18828 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm5345-201ENSMUST00000183076 1014 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28894-201ENSMUST00000185214 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29048-201ENSMUST00000185342 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29403-201ENSMUST00000185491 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28234-201ENSMUST00000185657 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28248-201ENSMUST00000186093 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm29633-202ENSMUST00000186217 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28829-201ENSMUST00000186231 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28261-201ENSMUST00000186417 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28815-201ENSMUST00000186751 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28608-201ENSMUST00000186860 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28122-201ENSMUST00000187088 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28420-201ENSMUST00000187340 615 ntBASIC4.85□□□□□ -1.63
Sdc1P18828 Gm28106-201ENSMUST00000187640 615 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms