Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm42983-201ENSMUST00000199879 815 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm7452-201ENSMUST00000200764 788 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm5418-201ENSMUST00000206932 528 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm45279-201ENSMUST00000210315 391 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm18628-201ENSMUST00000220584 475 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.05□□□□□ -1.6
Cdx1P18111 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdx1P18111 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm23927-201ENSMUST00000082466 215 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm29486-201ENSMUST00000088648 372 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdx1P18111 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Cdx1P18111 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdx1P18111 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm22284-201ENSMUST00000104132 132 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm12468-201ENSMUST00000116189 404 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm14865-201ENSMUST00000117523 494 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm15216-201ENSMUST00000118058 277 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm15493-201ENSMUST00000119461 528 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm15242-201ENSMUST00000122459 283 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx1P18111 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm23855-201ENSMUST00000158377 135 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm9672-201ENSMUST00000166437 425 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm20454-201ENSMUST00000172713 221 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Cdx1P18111 Mir6244-201ENSMUST00000184156 117 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm37189-201ENSMUST00000192131 298 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm37581-201ENSMUST00000192371 988 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm17895-201ENSMUST00000194028 874 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm45008-201ENSMUST00000206420 493 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdx1P18111 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdx1P18111 Gm18620-201ENSMUST00000222295 324 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 AC161374.1-201ENSMUST00000224191 794 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.04□□□□□ -1.6
Cdx1P18111 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms