Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm7700-201ENSMUST00000120273 970 ntBASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm15335-201ENSMUST00000122442 411 ntBASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm24735-201ENSMUST00000158859 118 ntBASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm8523-201ENSMUST00000211386 552 ntBASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 n-R5s173-201ENSMUST00000082620 119 ntBASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm7155-201ENSMUST00000121143 1671 ntBASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc180J3QNE4 Ear-ps2-201ENSMUST00000100689 466 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Atf1-ps-201ENSMUST00000120608 810 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm12094-201ENSMUST00000121781 472 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm8321-201ENSMUST00000181691 980 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm37341-201ENSMUST00000194680 371 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 AC116726.1-201ENSMUST00000215028 3497 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 CT025686.2-201ENSMUST00000227898 3315 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm44697-201ENSMUST00000207756 1679 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm11925-201ENSMUST00000121375 535 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm24359-201ENSMUST00000158418 221 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Ighv1-45-201ENSMUST00000193677 352 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 CU062626.1-201ENSMUST00000225248 505 ntBASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc180J3QNE4 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 AC122357.3-201ENSMUST00000221260 2293 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm13770-201ENSMUST00000117149 305 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm11833-201ENSMUST00000118393 853 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm29596-201ENSMUST00000185710 385 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm43148-201ENSMUST00000198237 520 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm32158-201ENSMUST00000200135 404 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Gm10064-201ENSMUST00000071235 399 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 AC154630.1-201ENSMUST00000215334 2440 ntBASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc180J3QNE4 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Gm12488-201ENSMUST00000122449 499 ntBASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Gm38291-201ENSMUST00000193671 259 ntBASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Gm37681-201ENSMUST00000193880 727 ntBASIC11.02□□□□□ -0.64
Ccdc180J3QNE4 Gm43516-201ENSMUST00000196891 322 ntBASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms