Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.17□□□□□ -1.26
Syngap1F6SEU4 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm24405-201ENSMUST00000083033 167 ntBASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.17□□□□□ -1.26
Syngap1F6SEU4 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Mir708-201ENSMUST00000102189 109 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm15719-201ENSMUST00000120619 635 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm23343-201ENSMUST00000158964 143 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm29588-201ENSMUST00000185738 298 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm21728-201ENSMUST00000188442 695 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm21889-201ENSMUST00000188487 695 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm21920-201ENSMUST00000190042 695 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm43160-201ENSMUST00000196453 421 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm6590-201ENSMUST00000203343 687 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm44849-201ENSMUST00000207595 484 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm19033-201ENSMUST00000208516 964 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm25147-201ENSMUST00000083030 105 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm25515-201ENSMUST00000083858 157 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.16□□□□□ -1.26
Syngap1F6SEU4 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Syngap1F6SEU4 Gm20541-201ENSMUST00000173035 1406 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Gm36936-201ENSMUST00000194508 2749 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Gm13059-201ENSMUST00000119881 398 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Gm23071-201ENSMUST00000158242 115 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Mir3080-201ENSMUST00000175010 79 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC7.15□□□□□ -1.26
Syngap1F6SEU4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms