Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm23577-201ENSMUST00000103950 110 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm13222-201ENSMUST00000119638 138 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm14122-201ENSMUST00000122076 973 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm16254-201ENSMUST00000131528 730 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm24429-201ENSMUST00000104076 132 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm14900-201ENSMUST00000120304 733 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm5215-201ENSMUST00000054380 405 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 AU020206-202ENSMUST00000206358 3009 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm15803-201ENSMUST00000120118 394 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm21041-201ENSMUST00000214829 823 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm232-201ENSMUST00000216549 2559 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm23534-201ENSMUST00000157539 97 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm15970-201ENSMUST00000160623 834 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm2314-201ENSMUST00000200391 586 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Gm25592-201ENSMUST00000082635 131 ntBASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col6a3E9PWQ3 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm45539-201ENSMUST00000210313 428 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm11975-201ENSMUST00000118772 481 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm25430-201ENSMUST00000157614 289 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms