Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm25395-201ENSMUST00000157343 272 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm27804-201ENSMUST00000185135 119 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm28801-201ENSMUST00000188761 449 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm37187-201ENSMUST00000193425 341 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm45636-201ENSMUST00000210497 1064 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Mir106b-201ENSMUST00000083580 82 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Clip3B9EHT4 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.52□□□□□ -1.37
Clip3B9EHT4 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir711-201ENSMUST00000102188 82 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm11501-201ENSMUST00000118039 581 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm13679-201ENSMUST00000118678 484 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm14353-201ENSMUST00000122200 869 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm23777-201ENSMUST00000158994 259 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm10074-201ENSMUST00000174543 249 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm28934-201ENSMUST00000186491 346 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm19739-201ENSMUST00000195941 153 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm44395-201ENSMUST00000197056 153 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-11-201ENSMUST00000197952 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-4-201ENSMUST00000198665 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-9-201ENSMUST00000200087 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Mir669a-8-201ENSMUST00000200268 87 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm4374-201ENSMUST00000204929 424 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm44681-201ENSMUST00000208447 842 ntBASIC6.51□□□□□ -1.37
Clip3B9EHT4 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Clip3B9EHT4 Gm8168-201ENSMUST00000209631 948 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms