Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Gm44754-201ENSMUST00000208155 400 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Gm45427-201ENSMUST00000209572 1253 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Gm2840-201ENSMUST00000048361 411 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Mir465c-1-201ENSMUST00000093560 81 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Ube3bQ9ES34 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ube3bQ9ES34 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Ube3bQ9ES34 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm26419-201ENSMUST00000104272 133 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm25379-201ENSMUST00000104338 114 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm25498-201ENSMUST00000104424 129 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm13768-201ENSMUST00000116469 929 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm22091-201ENSMUST00000116908 127 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm16412-201ENSMUST00000121602 273 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm22434-201ENSMUST00000158549 122 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm10177-202ENSMUST00000161698 207 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm5709-201ENSMUST00000177879 1165 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm26738-201ENSMUST00000181312 601 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm44773-201ENSMUST00000207374 557 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm44623-201ENSMUST00000207934 434 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm44892-201ENSMUST00000208595 488 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm10126-201ENSMUST00000221732 168 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm9800-201ENSMUST00000052615 336 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.58□□□□□ -1.04
Ube3bQ9ES34 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm22771-201ENSMUST00000104449 91 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm12268-201ENSMUST00000118398 442 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm15060-201ENSMUST00000119550 948 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm11575-201ENSMUST00000122243 228 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm23435-201ENSMUST00000157183 156 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm17022-201ENSMUST00000166415 922 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm27014-201ENSMUST00000182658 937 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm9114-201ENSMUST00000188558 997 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 Gm29525-201ENSMUST00000189844 699 ntBASIC8.57□□□□□ -1.04
Ube3bQ9ES34 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms