Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.92□□□□□ -1.46
Lima1Q9ERG0 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm13183-201ENSMUST00000118615 789 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm7494-201ENSMUST00000121248 441 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm11472-201ENSMUST00000121305 556 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm12504-202ENSMUST00000148026 306 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm24363-201ENSMUST00000158440 311 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm25904-201ENSMUST00000158491 143 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm11107-201ENSMUST00000165414 505 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm2619-202ENSMUST00000166777 651 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm38030-201ENSMUST00000192376 475 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Glycam1-204ENSMUST00000228895 641 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Lima1Q9ERG0 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm13156-201ENSMUST00000118348 321 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm13818-201ENSMUST00000119441 511 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm13991-201ENSMUST00000120190 648 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm5306-201ENSMUST00000203325 757 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Gm7351-201ENSMUST00000210745 580 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Lima1Q9ERG0 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms