Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm17997-201ENSMUST00000211801 840 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm19212-201ENSMUST00000216642 862 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm8526-201ENSMUST00000079153 475 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.92□□□□□ -1.3
Smc1aQ9CU62 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm23884-201ENSMUST00000122687 294 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm21542-201ENSMUST00000182307 993 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm38291-201ENSMUST00000193671 259 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm43354-201ENSMUST00000196862 346 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm3800-201ENSMUST00000221086 554 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm22126-201ENSMUST00000083244 142 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm26063-201ENSMUST00000083378 107 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm14667-201ENSMUST00000119448 1350 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Smc1aQ9CU62 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm14870-201ENSMUST00000118414 156 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm12565-201ENSMUST00000119004 649 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm14300-201ENSMUST00000120800 946 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm15275-201ENSMUST00000154752 347 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm22655-201ENSMUST00000174949 96 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm6055-201ENSMUST00000180532 378 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm27006-201ENSMUST00000182218 943 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm9274-201ENSMUST00000182505 984 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm29519-201ENSMUST00000186994 398 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm5853-201ENSMUST00000197183 632 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm43501-201ENSMUST00000202513 107 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms