Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm23888-201ENSMUST00000122690 253 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm14349-201ENSMUST00000137155 902 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm5871-201ENSMUST00000176461 718 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm4845-201ENSMUST00000179202 562 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm29385-201ENSMUST00000186831 363 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm7554-201ENSMUST00000202282 574 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.73□□□□□ -1.49
Use1Q9CQ56 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Use1Q9CQ56 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm22267-201ENSMUST00000104008 131 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm23027-201ENSMUST00000158771 158 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm20690-201ENSMUST00000177341 315 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm29551-201ENSMUST00000190913 698 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm36378-201ENSMUST00000201709 388 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm43850-201ENSMUST00000202021 578 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm44539-201ENSMUST00000206010 238 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.72□□□□□ -1.49
Use1Q9CQ56 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Use1Q9CQ56 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Use1Q9CQ56 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.71□□□□□ -1.49
Use1Q9CQ56 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Use1Q9CQ56 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms