Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.01□□□□□ -1.45
Cstf3Q99LI7 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cstf3Q99LI7 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm44045-201ENSMUST00000204906 2520 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm43328-201ENSMUST00000198544 1434 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Snord65-201ENSMUST00000104269 72 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm12106-201ENSMUST00000116006 1200 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm9311-201ENSMUST00000118042 1269 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm15502-201ENSMUST00000121449 208 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm23954-201ENSMUST00000157213 353 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm16297-201ENSMUST00000161466 459 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm27005-201ENSMUST00000182783 921 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm28439-201ENSMUST00000187714 876 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm28060-201ENSMUST00000191554 189 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm8869-201ENSMUST00000195222 947 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm43744-201ENSMUST00000196387 688 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6□□□□□ -1.45
Cstf3Q99LI7 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm44892-201ENSMUST00000208595 488 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm44548-201ENSMUST00000208929 192 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 AC154640.3-201ENSMUST00000227492 846 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 AC101205.1-201ENSMUST00000227916 907 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Cstf3Q99LI7 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Gm43682-201ENSMUST00000202150 2090 ntBASIC6□□□□□ -1.45
Cstf3Q99LI7 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cstf3Q99LI7 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm25877-201ENSMUST00000104326 129 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm14173-201ENSMUST00000117690 278 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm8692-201ENSMUST00000118102 438 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm12442-201ENSMUST00000118372 338 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm4914-201ENSMUST00000119757 459 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm7212-201ENSMUST00000120817 348 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm14489-201ENSMUST00000120868 901 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm23894-201ENSMUST00000158107 313 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm23897-201ENSMUST00000158110 158 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Mir7685-201ENSMUST00000183555 62 ntBASIC5.99□□□□□ -1.45
Cstf3Q99LI7 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cstf3Q99LI7 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms