Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm22927-201ENSMUST00000104268 131 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm26012-201ENSMUST00000104411 128 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm10243-201ENSMUST00000117571 333 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm13160-201ENSMUST00000118441 627 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm23619-201ENSMUST00000178411 94 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm25474-201ENSMUST00000179052 94 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm22047-201ENSMUST00000179176 94 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm27651-201ENSMUST00000183465 246 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm27428-201ENSMUST00000184289 110 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm5116-201ENSMUST00000187732 463 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm29627-201ENSMUST00000187984 463 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm29068-201ENSMUST00000191607 400 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm17979-201ENSMUST00000196646 611 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm44927-201ENSMUST00000207573 716 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm16475-202ENSMUST00000209033 528 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 AC122465.3-201ENSMUST00000221644 355 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 AC131745.1-201ENSMUST00000223660 330 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 AC147044.1-201ENSMUST00000223850 552 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 AC167013.6-201ENSMUST00000226587 1067 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm7887-201ENSMUST00000056948 537 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Snora57-201ENSMUST00000093658 148 ntBASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pcdhb3Q91XZ7 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Gm44695-201ENSMUST00000205567 1631 ntBASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Gm3940-201ENSMUST00000105087 432 ntBASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7.81□□□□□ -1.16
Pcdhb3Q91XZ7 Gm15399-201ENSMUST00000118055 724 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms