Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm7058-201ENSMUST00000119209 902 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Mir6362-201ENSMUST00000184329 107 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm3605-201ENSMUST00000185858 440 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm28149-201ENSMUST00000187102 378 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm29111-201ENSMUST00000188823 696 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm28768-201ENSMUST00000189034 378 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm28584-201ENSMUST00000191489 696 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm38138-201ENSMUST00000193274 696 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm37991-201ENSMUST00000194297 696 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm18103-201ENSMUST00000216621 779 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm18591-201ENSMUST00000220568 763 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.86□□□□□ -1.47
Lsm1Q8VC85 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm26340-201ENSMUST00000102365 99 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm14998-201ENSMUST00000120502 495 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm13214-201ENSMUST00000122137 408 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm14349-201ENSMUST00000137155 902 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm27193-201ENSMUST00000184217 586 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm44856-201ENSMUST00000206639 304 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Lsm1Q8VC85 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms