Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm28990-207ENSMUST00000191219 615 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm36468-201ENSMUST00000192119 615 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm31572-201ENSMUST00000193341 615 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm30175-201ENSMUST00000194173 615 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm37235-201ENSMUST00000195171 59 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm30858-201ENSMUST00000195516 615 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm43054-201ENSMUST00000199495 884 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Syne4Q8CII8 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.07□□□□□ -1.28
Syne4Q8CII8 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC7.07□□□□□ -1.28
Syne4Q8CII8 AC154583.1-201ENSMUST00000224788 655 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm5341-201ENSMUST00000058881 489 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Syne4Q8CII8 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Syne4Q8CII8 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Syne4Q8CII8 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Syne4Q8CII8 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Syne4Q8CII8 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.07□□□□□ -1.28
Syne4Q8CII8 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.07□□□□□ -1.28
Syne4Q8CII8 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm24230-201ENSMUST00000104313 129 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm8501-201ENSMUST00000117684 432 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm11481-201ENSMUST00000120069 255 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm12396-201ENSMUST00000121600 306 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm12650-201ENSMUST00000121966 258 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm24741-201ENSMUST00000158857 106 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm20397-201ENSMUST00000174520 362 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm1972-201ENSMUST00000181606 964 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm4410-201ENSMUST00000199349 686 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm43456-201ENSMUST00000202519 457 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC147615.1-201ENSMUST00000218914 441 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC153522.1-201ENSMUST00000220047 1090 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm7557-201ENSMUST00000221935 865 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm9202-201ENSMUST00000223036 437 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC168056.2-201ENSMUST00000223591 269 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm22300-201ENSMUST00000082661 126 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Mir331-201ENSMUST00000083673 96 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Syne4Q8CII8 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.06□□□□□ -1.28
Syne4Q8CII8 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm14220-201ENSMUST00000118114 449 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm12303-201ENSMUST00000119506 673 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm12399-201ENSMUST00000121475 446 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Scarna6-201ENSMUST00000158656 265 ntBASIC7.05□□□□□ -1.28
Syne4Q8CII8 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.05□□□□□ -1.28
Syne4Q8CII8 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms