Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm25675-201ENSMUST00000174979 118 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm7626-201ENSMUST00000195801 353 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm9367-201ENSMUST00000205703 546 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45888-201ENSMUST00000212348 1229 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm18329-201ENSMUST00000215832 589 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm23927-201ENSMUST00000082466 215 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.99□□□□□ -1.45
Ccdc28bQ8CEG5 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm24790-201ENSMUST00000104285 132 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm12842-201ENSMUST00000117298 476 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm14173-201ENSMUST00000117690 278 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm15842-201ENSMUST00000120513 618 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm10157-201ENSMUST00000139408 343 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm24477-201ENSMUST00000157438 103 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm22160-201ENSMUST00000158405 328 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm27006-201ENSMUST00000182218 943 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Mir8105-201ENSMUST00000184718 89 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm21654-201ENSMUST00000188086 691 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm29605-201ENSMUST00000190800 292 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm38185-201ENSMUST00000193195 694 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43546-201ENSMUST00000196721 943 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm35013-201ENSMUST00000197218 832 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm43576-201ENSMUST00000197937 871 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm42938-201ENSMUST00000198414 1072 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm42713-201ENSMUST00000202709 945 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm3549-201ENSMUST00000203873 794 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm45136-201ENSMUST00000205793 943 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm44809-201ENSMUST00000208305 993 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm18040-201ENSMUST00000217922 827 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm22300-201ENSMUST00000082661 126 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Gm22581-201ENSMUST00000083735 136 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28bQ8CEG5 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms