Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim9Q8C7M3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm12931-201ENSMUST00000117046 324 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm1866-201ENSMUST00000120701 477 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm6067-201ENSMUST00000121648 491 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm25332-201ENSMUST00000158038 105 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Mir7669-201ENSMUST00000183442 58 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm5260-201ENSMUST00000186157 949 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm28918-201ENSMUST00000188822 699 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm29111-201ENSMUST00000188823 696 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm28584-201ENSMUST00000191489 696 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm38138-201ENSMUST00000193274 696 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm37991-201ENSMUST00000194297 696 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm37774-201ENSMUST00000194401 245 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm36378-201ENSMUST00000201709 388 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 AC173345.3-201ENSMUST00000221245 1093 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim9Q8C7M3 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.77□□□□□ -1.32
Trim9Q8C7M3 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm12262-201ENSMUST00000119915 305 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm15696-201ENSMUST00000121730 445 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm12438-201ENSMUST00000122034 336 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm14349-201ENSMUST00000137155 902 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm8550-201ENSMUST00000161621 653 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm16147-201ENSMUST00000162143 373 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm28080-201ENSMUST00000188552 722 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm21524-201ENSMUST00000190499 696 ntBASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim9Q8C7M3 Gm21715-201ENSMUST00000191056 694 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms